- name: bclconvert test_bclconvert
  command: nextflow run ./tests/modules/bclconvert -entry test_bclconvert -c ./tests/config/nextflow.config  -c ./tests/modules/bclconvert/nextflow.config
  tags:
    - bclconvert
  files:
    - path: output/bclconvert/Logs/Errors.log
    - path: output/bclconvert/Logs/FastqComplete.txt
    - path: output/bclconvert/Logs/Info.log
    - path: output/bclconvert/Logs/Warnings.log
    - path: output/bclconvert/Reports/Adapter_Metrics.csv
      md5sum: 989240b8840b2169ac1061f952c90f6c
    - path: output/bclconvert/Reports/Demultiplex_Stats.csv
      md5sum: 93949a8cd96f907d83e0808c1ec2a04b
    - path: output/bclconvert/Reports/IndexMetricsOut.bin
      md5sum: 9e688c58a5487b8eaf69c9e1005ad0bf
    - path: output/bclconvert/Reports/Index_Hopping_Counts.csv
      md5sum: 1059369e375fd8f8423c0f6c934be978
    - path: output/bclconvert/Reports/Quality_Metrics.csv
      md5sum: 6614accb1bb414fe312b17b81f5521f7
    - path: output/bclconvert/Reports/RunInfo.xml
      md5sum: 03038959f4dd181c86bc97ae71fe270a
    - path: output/bclconvert/Reports/SampleSheet.csv
      md5sum: dc0dffd39541dd6cc5b4801d768a8d2b
    - path: output/bclconvert/Reports/Top_Unknown_Barcodes.csv
      md5sum: 2e2faba761137f228e56bd3428453ccc
    - path: output/bclconvert/Reports/fastq_list.csv
      md5sum: 05bc84f51840f5754cfb8381b36f2cb0
    - path: output/bclconvert/Sample1_S1_L001_R1_001.fastq.gz
      md5sum: 57d2f3b389656245f923351d3e3d2d65
    - path: output/bclconvert/Undetermined_S0_L001_R1_001.fastq.gz
      md5sum: a4745abc5e7fdb89cc6df3069f3c6e69
    - path: output/bclconvert/flowcell/InterOp/ControlMetricsOut.bin
      md5sum: 6d77b38d0793a6e1ce1e85706e488953
    - path: output/bclconvert/flowcell/InterOp/CorrectedIntMetricsOut.bin
      md5sum: 2bbf84d3be72734addaa2fe794711434
    - path: output/bclconvert/flowcell/InterOp/ErrorMetricsOut.bin
      md5sum: 38c88def138e9bb832539911affdb286
    - path: output/bclconvert/flowcell/InterOp/ExtractionMetricsOut.bin
      md5sum: 7497c3178837eea8f09350b5cd252e99
    - path: output/bclconvert/flowcell/InterOp/IndexMetricsOut.bin
    - path: output/bclconvert/flowcell/InterOp/QMetricsOut.bin
      md5sum: 7e9f198d53ebdfbb699a5f94cf1ed51c
    - path: output/bclconvert/flowcell/InterOp/TileMetricsOut.bin
      md5sum: 83891751ec1c91a425a524b476b6ca3c