- name: tiddit sv test_tiddit_sv_bam
  command: nextflow run ./tests/modules/tiddit/sv -entry test_tiddit_sv_bam -c ./tests/config/nextflow.config -c ./tests/modules/tiddit/sv/nextflow.config
  tags:
    - tiddit
    - tiddit/sv
  files:
    - path: output/tiddit/test.ploidies.tab
      md5sum: 6319d3611f7b6b94425a184d274b3dfc
    - path: output/tiddit/test.vcf
      md5sum: 157907671297c34bacfd3e73eff9bbdf

- name: tiddit sv test_tiddit_sv_cram
  command: nextflow run ./tests/modules/tiddit/sv -entry test_tiddit_sv_cram -c ./tests/config/nextflow.config -c ./tests/modules/tiddit/sv/nextflow.config
  tags:
    - tiddit
    - tiddit/sv
  files:
    - path: output/tiddit/test.ploidies.tab
      md5sum: f1162a940ddc8b963f6e0e506bb5c136
    - path: output/tiddit/test.vcf
      md5sum: 56687eeffa452f78f18d54a69dd17c78

- name: tiddit sv test_tiddit_sv_nobwa_bam
  command: nextflow run ./tests/modules/tiddit/sv -entry test_tiddit_sv_nobwa_bam -c ./tests/config/nextflow.config -c ./tests/modules/tiddit/sv/nextflow.config
  tags:
    - tiddit
    - tiddit/sv
  files:
    - path: output/tiddit/test.ploidies.tab
      md5sum: 6319d3611f7b6b94425a184d274b3dfc
    - path: output/tiddit/test.vcf
      md5sum: ddac94f9cd4f991b6ce2052d7f78a525

- name: tiddit sv test_tiddit_sv_nobwa_cram
  command: nextflow run ./tests/modules/tiddit/sv -entry test_tiddit_sv_nobwa_cram -c ./tests/config/nextflow.config -c ./tests/modules/tiddit/sv/nextflow.config
  tags:
    - tiddit
    - tiddit/sv
  files:
    - path: output/tiddit/test.ploidies.tab
      md5sum: f1162a940ddc8b963f6e0e506bb5c136
    - path: output/tiddit/test.vcf
      md5sum: 680e60574cc28d38c9673a916ecd675c