name: bwa index
description: create indexes for BWA from a fasta file
keywords:
    - index
tools:
    - bwa:
        description: |
            BWA is a software package for mapping DNA sequences against a large reference genome, such as the human genome.
        homepage: http://bio-bwa.sourceforge.net/
        documentation: http://www.htslib.org/doc/samtools.html
        arxiv: arXiv:1303.3997
input:
    -
        - input:
            type: file
            description: Input fasta file
            pattern: *.{fasta,fa}
output:
    -
        - index:
            type: file
            description: bwa indexes file
            pattern: *.{fasta,fa}.{amb,ann,bwt,pac,sa}
authors:
    - @maxulysse