- name: minimap2 align single-end
  command: nextflow run ./tests/modules/minimap2/align -entry test_minimap2_align_single_end -c tests/config/nextflow.config
  tags:
    - minimap2
    - minimap2/align
  files:
    - path: ./output/minimap2/test.paf
      md5sum: 70e8cf299ee3ecd33e629d10c1f588ce

- name: minimap2 align paired-end
  command: nextflow run ./tests/modules/minimap2/align -entry test_minimap2_align_paired_end -c tests/config/nextflow.config
  tags:
    - minimap2
    - minimap2/align
  files:
    - path: ./output/minimap2/test.paf
      md5sum: 5e7b55a26bf0ea3a2843423d3e0b9a28