- name: freebayes germline test_freebayes
  command: nextflow run tests/modules/freebayes/germline -entry test_freebayes -c tests/config/nextflow.config
  tags:
    - freebayes
    - freebayes/germline
  files:
    - path: output/freebayes/test.vcf.gz
      md5sum: 1ec210ad27514c7a4140c924dc66d979

- name: freebayes germline test_freebayes_bed
  command: nextflow run tests/modules/freebayes/germline -entry test_freebayes_bed -c tests/config/nextflow.config
  tags:
    - freebayes
    - freebayes/germline
  files:
    - path: output/freebayes/test.vcf.gz
      md5sum: e8923cccd5dac196f72d3d3997a60706

- name: freebayes germline test_freebayes_cram
  command: nextflow run tests/modules/freebayes/germline -entry test_freebayes_cram -c tests/config/nextflow.config
  tags:
    - freebayes
    - freebayes/germline
  files:
    - path: output/freebayes/test.vcf.gz
      md5sum: cb57a3ed154618e3aa4a5272fcfb7521