- name: samtools flagstat
  command: nextflow run ./tests/software/samtools/flagstat -entry test_samtools_flagstat -c tests/config/nextflow.config
  tags:
    - samtools
    - samtools_flagstat
  files:
    - path: output/samtools/test.paired_end.sorted.bam.flagstat
      md5sum: 80590621c74f5ee43ada20d010a3837f