- name: allelecounter test_allelecounter_bam
  command: nextflow run ./tests/modules/allelecounter -entry test_allelecounter_bam -c ./tests/config/nextflow.config -c ./tests/modules/allelecounter/nextflow.config
  tags:
    - allelecounter
  files:
    - path: output/allelecounter/test.alleleCount
      md5sum: 2bbe9d7331b78bdac30fe30dbc5fdaf3

- name: allelecounter test_allelecounter_cram
  command: nextflow run ./tests/modules/allelecounter -entry test_allelecounter_cram -c ./tests/config/nextflow.config -c ./tests/modules/allelecounter/nextflow.config
  tags:
    - allelecounter
  files:
    - path: output/allelecounter/test.alleleCount
      md5sum: 2f83352a185168c7c98e9e42550b2856