process DEEPBGC_DOWNLOAD { tag "download" label 'process_low' conda (params.enable_conda ? "bioconda::deepbgc=0.1.30" : null) container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ? 'https://depot.galaxyproject.org/singularity/deepbgc:0.1.30--pyhb7b1952_1': 'quay.io/biocontainers/deepbgc:0.1.30--pyhb7b1952_1' }" output: path "deepbgc_db/" , emit: db path "versions.yml" , emit: versions when: task.ext.when == null || task.ext.when script: def args = task.ext.args ?: '' """ export DEEPBGC_DOWNLOADS_DIR='./deepbgc_db' deepbgc \\ download cat <<-END_VERSIONS > versions.yml "${task.process}": deepbgc: \$(echo \$(deepbgc info 2>&1 /dev/null/ | grep 'version' | cut -d " " -f3) ) END_VERSIONS """ }