#!/usr/bin/env nextflow nextflow.enable.dsl = 2 include { COOLER_MERGE } from '../../../../modules/cooler/merge/main.nf' include { COOLER_DUMP } from '../../../../modules/cooler/dump/main.nf' workflow test_cooler_merge { input = [ [ id:'test' ], // meta map [ file(params.test_data['generic']['cooler']['test_merge_cool'], checkIfExists: true), file(params.test_data['generic']['cooler']['test_merge_cool_cp2'], checkIfExists: true) ] ] COOLER_MERGE ( input ) COOLER_DUMP ( COOLER_MERGE.out.cool, "" ) }