- name: samtools flagstat
  command: nextflow run ./tests/modules/samtools/flagstat -entry test_samtools_flagstat -c tests/config/nextflow.config
  tags:
    - samtools
    - samtools/flagstat
  files:
    - path: ./output/samtools/test.paired_end.sorted.bam.flagstat
      md5sum: 4f7ffd1e6a5e85524d443209ac97d783