name: bwa_index description: Create BWA index for reference genome keywords: - index - fasta - genome - reference tools: - bwa: description: | BWA is a software package for mapping DNA sequences against a large reference genome, such as the human genome. homepage: http://bio-bwa.sourceforge.net/ documentation: http://www.htslib.org/doc/samtools.html arxiv: arXiv:1303.3997 licence: ['GPL-3.0-or-later'] input: - fasta: type: file description: Input genome fasta file output: - index: type: file description: BWA genome index files pattern: "*.{amb,ann,bwt,pac,sa}" - versions: type: file description: File containing software versions pattern: "versions.yml" authors: - "@drpatelh" - "@maxulysse"