- name: ataqv mkarv test_ataqv_mkarv
  command: nextflow run ./tests/modules/ataqv/mkarv -entry test_ataqv_mkarv -c ./tests/config/nextflow.config  -c ./tests/modules/ataqv/mkarv/nextflow.config
  tags:
    - ataqv/mkarv
    - ataqv

  files:
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    - path: output/ataqv/html/css/datatables.min.css
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    - path: output/ataqv/html/css/font-awesome.min.css
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    - path: output/ataqv/html/css/normalize.css
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    - path: output/ataqv/html/data/1.json.gz
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    - path: output/ataqv/html/fonts/fontawesome-webfont.woff
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    - path: output/ataqv/html/fonts/sourcesanspro-regular.woff
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    - path: output/ataqv/html/index.html
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    - path: output/ataqv/html/js/ataqv.js
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    - path: output/ataqv/html/js/configuration.js
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    - path: output/ataqv/html/js/jszip.min.js
      md5sum: 09e492cb492ffa75484bbe10f1f721d1
    - path: output/ataqv/test.ataqv.json
      contains:
        - '"properly_paired_and_mapped_reads": 192,'