name: bwa index description: create indexes for BWA from a fasta file keywords: - index tools: - bwa: description: | BWA is a software package for mapping DNA sequences against a large reference genome, such as the human genome. homepage: http://bio-bwa.sourceforge.net/ documentation: http://www.htslib.org/doc/samtools.html arxiv: arXiv:1303.3997 input: - - input: type: file description: Input fasta file pattern: "*.{fasta,fa}" output: - - index: type: file description: bwa indexes file pattern: "*.{fasta,fa}.{amb,ann,bwt,pac,sa}" authors: - "@maxulysse"