- name: gatk4 revertsam test_gatk4_revertsam
  command: nextflow run ./tests/modules/gatk4/revertsam -entry test_gatk4_revertsam -c ./tests/config/nextflow.config -c ./tests/modules/gatk4/revertsam/nextflow.config
  tags:
    - gatk4
    - gatk4/revertsam
  files:
    - path: output/gatk4/test.reverted.bam
      md5sum: f783a88deb45c3a2c20ca12cbe1c5652
    - path: output/gatk4/versions.yml

- name: gatk4 revertsam test_gatk4_revertsam_stubs
  command: nextflow run ./tests/modules/gatk4/revertsam -entry test_gatk4_revertsam_stubs -c ./tests/config/nextflow.config -c ./tests/modules/gatk4/revertsam/nextflow.config -stub-run
  tags:
    - gatk4
    - gatk4/revertsam
  files:
    - path: output/gatk4/test.reverted.bam
    - path: output/gatk4/versions.yml