- name: bakta
  command: nextflow run ./tests/modules/bakta -entry test_bakta -c tests/config/nextflow.config -stub-run
  tags:
    - bakta
  files:
    - path: output/bakta/test.embl
    - path: output/bakta/test.faa
    - path: output/bakta/test.ffn
    - path: output/bakta/test.fna
    - path: output/bakta/test.gbff
    - path: output/bakta/test.gff3
    - path: output/bakta/test.hypotheticals.tsv
    - path: output/bakta/test.hypotheticals.faa
    - path: output/bakta/test.tsv