name: snpdists description: Pairwise SNP distance matrix from a FASTA sequence alignment keywords: - snp-dists - distance-matrix tools: - snpdists: description: Convert a FASTA alignment to SNP distance matrix homepage: https://github.com/tseemann/snp-dists documentation: https://github.com/tseemann/snp-dists tool_dev_url: https://github.com/tseemann/snp-dists doi: "" licence: ['GPL v3'] input: - meta: type: map description: | Groovy Map containing sample information e.g. [ id:'test', single_end:false ] - alignment: type: file description: The input FASTA sequence alignment file pattern: "*.{fasta,fasta.gz}" output: - meta: type: map description: | Groovy Map containing sample information e.g. [ id:'test', single_end:false ] - tsv: type: file description: The output TSV file containing SNP distance matrix pattern: "*.tsv" - version: type: file description: File containing software version pattern: "*.{version.txt}" authors: - "@abhi18av"