- name: genrich test_genrich
  command: nextflow run tests/modules/genrich -entry test_genrich -c tests/config/nextflow.config
  tags:
    - genrich
  files:
    - path: output/genrich/test.narrowPeak
      md5sum: 6afabdd3f691c7c84c66ff8a23984681

- name: genrich test_genrich_ctrl
  command: nextflow run tests/modules/genrich -entry test_genrich_ctrl -c tests/config/nextflow.config
  tags:
    - genrich
  files:
    - path: output/genrich/test.narrowPeak
      md5sum: 6afabdd3f691c7c84c66ff8a23984681

- name: genrich test_genrich_all_outputs
  command: nextflow run tests/modules/genrich -entry test_genrich_all_outputs -c tests/config/nextflow.config
  tags:
    - genrich
  files:
    - path: output/genrich/test.duplicates.txt
      md5sum: a92893f905fd8b3751bc6a960fbfe7ba
    - path: output/genrich/test.intervals.bed
      md5sum: 52edf47e6641c0cc03f9cca7324f7eaa
    - path: output/genrich/test.narrowPeak
      md5sum: e45eb7d000387975050c2e85c164e5be
    - path: output/genrich/test.pileup.bedGraph
      md5sum: e4f7fa664cd4ed2cf3a1a3a9eb415e71
    - path: output/genrich/test.pvalues.bedGraph
      md5sum: 564859953704983393d4b7d6317060cd

- name: genrich test_genrich_atacseq
  command: nextflow run tests/modules/genrich -entry test_genrich_atacseq -c tests/config/nextflow.config
  tags:
    - genrich
  files:
    - path: output/genrich/test.narrowPeak
      md5sum: ddea556b820f8be3695ffdf6c6f70aff