def VERSION = '4.11' // Version information not provided by tool on CLI process HOMER_MAKEUCSCFILE { tag "$meta.id" label 'process_medium' conda (params.enable_conda ? "bioconda::homer=4.11=pl526hc9558a2_3" : null) container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ? 'https://depot.galaxyproject.org/singularity/homer:4.11--pl526hc9558a2_3' : 'quay.io/biocontainers/homer:4.11--pl526hc9558a2_3' }" input: tuple val(meta), path(tagDir) output: tuple val(meta), path("tag_dir/*ucsc.bedGraph.gz"), emit: bedGraph path "versions.yml" , emit: versions script: def args = task.ext.args ?: '' def prefix = task.ext.prefix ?: "${meta.id}" """ makeUCSCfile \\ $tagDir \\ -o auto \\ $args cat <<-END_VERSIONS > versions.yml "${task.process}": homer: $VERSION END_VERSIONS """ }