name: bedtools_slop description: Adds a specified number of bases in each direction (unique values may be specified for either -l or -r) keywords: - bed - slopBed tools: - bedtools: description: | A set of tools for genomic analysis tasks, specifically enabling genome arithmetic (merge, count, complement) on various file types. documentation: https://bedtools.readthedocs.io/en/latest/content/tools/slop.html licence: ['MIT'] input: - meta: type: map description: | Groovy Map containing sample information e.g. [ id:'test', single_end:false ] - bed: type: file description: Input BED file pattern: "*.{bed}" output: - meta: type: map description: | Groovy Map containing sample information e.g. [ id:'test', single_end:false ] - bed: type: file description: Slopped BED file pattern: "*.{bed}" - versions: type: file description: File containing software versions pattern: "versions.yml" authors: - "@Emiller88" - "@sruthipsuresh" - "@drpatelh"