- name: isoseq3 cluster test_isoseq3_cluster
  command: nextflow run tests/modules/isoseq3/cluster -entry test_isoseq3_cluster -c tests/config/nextflow.config
  tags:
    - isoseq3
    - isoseq3/cluster
  files:
    - path: output/isoseq3/test.bam
      md5sum: ca8277f4d8fe1bba68ba266c42b46dd1
    - path: output/isoseq3/test.bam.pbi
      md5sum: cbc06657b4543faba7ff886b3b12b862
    - path: output/isoseq3/test.cluster
      md5sum: d5059d856763fc5591332980bfc0d57b
    - path: output/isoseq3/test.cluster_report.csv
      md5sum: 342d97dc10aedf80a45977edcb491c62
    - path: output/isoseq3/test.hq.bam
      md5sum: e93ea85776c35c246364d954032c2ea9
    - path: output/isoseq3/test.hq.bam.pbi
      md5sum: 5a8ea7668e8f8e173478b28cbb6ab515
    - path: output/isoseq3/test.lq.bam
      md5sum: 4ea0e4f4a6cc689dcc275adcdf688fad
    - path: output/isoseq3/test.lq.bam.pbi
      md5sum: f5edc24711b2c8d6474d60cb69022af0
    - path: output/isoseq3/test.singletons.bam
      md5sum: 73d131920bd42e1fc5fca2e6cb71f4b2
    - path: output/isoseq3/test.singletons.bam.pbi
      md5sum: 73980863be4b5bda2846325c737f0b5e
    - path: output/isoseq3/test.transcriptset.xml
      contains: [ 'PacBio.DataSet.TranscriptSet' ]