- name: mosdepth
  command: nextflow run ./tests/modules/mosdepth -entry test_mosdepth -c ./tests/config/nextflow.config -c ./tests/modules/mosdepth/nextflow.config
  tags:
    - mosdepth
  files:
    - path: ./output/mosdepth/test.per-base.bed.gz.csi
      md5sum: b2aad62c41a7146680d31df505fcc8c5
    - path: ./output/mosdepth/test.per-base.bed.gz
      md5sum: 11b3f649072c2c7453febb085b1a9c33
    - path: ./output/mosdepth/test.mosdepth.global.dist.txt
      md5sum: 2a1de1b0ecc361a21cd296ec4e1efd6a
    - path: ./output/mosdepth/test.mosdepth.summary.txt
      md5sum: 7b249dd3b3e58cc122fbd25ea84aa25d

- name: mosdepth window
  command: nextflow run ./tests/modules/mosdepth -entry test_mosdepth_window -c ./tests/config/nextflow.config -c ./tests/modules/mosdepth/nextflow.config
  tags:
    - mosdepth
  files:
    - path: ./output/mosdepth/test.per-base.bed.gz.csi
      md5sum: b2aad62c41a7146680d31df505fcc8c5
    - path: ./output/mosdepth/test.per-base.bed.gz
      md5sum: 11b3f649072c2c7453febb085b1a9c33
    - path: ./output/mosdepth/test.mosdepth.global.dist.txt
      md5sum: 2a1de1b0ecc361a21cd296ec4e1efd6a
    - path: ./output/mosdepth/test.regions.bed.gz
      md5sum: 64e1ced01c4443d7c1796ef553992f0c
    - path: ./output/mosdepth/test.regions.bed.gz.csi
      md5sum: 9e312b4b0784bd46dfbd23b3a8afed6a
    - path: ./output/mosdepth/test.mosdepth.region.dist.txt
      md5sum: 65fbc824c4212c6884354d8ac72ad37e
    - path: ./output/mosdepth/test.mosdepth.summary.txt
      md5sum: 11804907dab069ddb99ca97bf2698572

- name: mosdepth bed
  command: nextflow run ./tests/modules/mosdepth -entry test_mosdepth_bed -c ./tests/config/nextflow.config -c ./tests/modules/mosdepth/nextflow.config
  tags:
    - mosdepth
  files:
    - path: ./output/mosdepth/test.per-base.bed.gz.csi
      md5sum: b2aad62c41a7146680d31df505fcc8c5
    - path: ./output/mosdepth/test.per-base.bed.gz
      md5sum: 11b3f649072c2c7453febb085b1a9c33
    - path: ./output/mosdepth/test.mosdepth.global.dist.txt
      md5sum: 2a1de1b0ecc361a21cd296ec4e1efd6a
    - path: ./output/mosdepth/test.regions.bed.gz
      md5sum: 347f877700d1dc42c95157199eff25d5
    - path: ./output/mosdepth/test.regions.bed.gz.csi
      md5sum: ed5fbf46e3bdcbf60094df295bc40356
    - path: ./output/mosdepth/test.mosdepth.region.dist.txt
      md5sum: 295564628113d2ec0ca34d7f661cfea8
    - path: ./output/mosdepth/test.mosdepth.summary.txt
      md5sum: b07817412fd17819c14541e63bc4926c