- name: nextclade run
  command: nextflow run ./tests/modules/nextclade/run -entry test_nextclade_run -c ./tests/config/nextflow.config -c ./tests/modules/nextclade/run/nextflow.config
  tags:
    - nextclade
    - nextclade/run
  files:
    - path: output/nextclade/test.json
    - path: output/nextclade/test.csv
      md5sum: 3b87a4da190ba2e1fdc8418dc3a7ffdb
    - path: output/nextclade/test.tsv
      md5sum: 449393288e8734a02def139c550a8d9b
    - path: output/nextclade/test.tree.json
      md5sum: 9c6e33cb7ff860bee6194847bd2c855c