- name: gatk4 reblockgvcf test_gatk4_reblockgvcf
  command: nextflow run ./tests/modules/gatk4/reblockgvcf -entry test_gatk4_reblockgvcf -c ./tests/config/nextflow.config  -c ./tests/modules/gatk4/reblockgvcf/nextflow.config
  tags:
    - gatk4/reblockgvcf
    - gatk4
  files:
    - path: output/gatk4/test.reblock.g.vcf.gz
      contains: '[ # TODO nf-core: file md5sum was variable, please replace this text with a string found in the file instead ]'
    - path: output/gatk4/test.reblock.g.vcf.gz.tbi
      md5sum: e1aab7d826a151828fd0671ec5aed2e0

- name: gatk4 reblockgvcf test_gatk4_reblockgvcf_intervals
  command: nextflow run ./tests/modules/gatk4/reblockgvcf -entry test_gatk4_reblockgvcf_intervals -c ./tests/config/nextflow.config  -c ./tests/modules/gatk4/reblockgvcf/nextflow.config
  tags:
    - gatk4/reblockgvcf
    - gatk4
  files:
    - path: output/gatk4/test.reblock.g.vcf.gz
      contains: '[ # TODO nf-core: file md5sum was variable, please replace this text with a string found in the file instead ]'
    - path: output/gatk4/test.reblock.g.vcf.gz.tbi
      md5sum: e7ca7e9fe76ce12198fd54ec9a64fad4

- name: gatk4 reblockgvcf test_gatk4_reblockgvcf_dbsnp
  command: nextflow run ./tests/modules/gatk4/reblockgvcf -entry test_gatk4_reblockgvcf_dbsnp -c ./tests/config/nextflow.config  -c ./tests/modules/gatk4/reblockgvcf/nextflow.config
  tags:
    - gatk4/reblockgvcf
    - gatk4
  files:
    - path: output/gatk4/test.reblock.g.vcf.gz
      contains: '[ # TODO nf-core: file md5sum was variable, please replace this text with a string found in the file instead ]'
    - path: output/gatk4/test.reblock.g.vcf.gz.tbi
      md5sum: 017edea27a253eb51cc4505d00dcb295