mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-12-22 11:08:17 +00:00
3aacd46da2
* backfilled modules with meta.yml that had no license identifier * harmonized BSD license names * whitespace linting at modules/unzip/meta.yml:12 * harmonized software from US NIH-NCBI/NIST to 'US-Government-Work' * Update modules/bcftools/index/meta.yml `bcftools` is dual-licensed, use associative array to allow for multiple licenses Co-authored-by: Michael L Heuer <heuermh@acm.org> Co-authored-by: Michael L Heuer <heuermh@acm.org>
32 lines
868 B
YAML
32 lines
868 B
YAML
name: snpsites
|
|
description: Rapidly extracts SNPs from a multi-FASTA alignment.
|
|
keywords:
|
|
- SNPs
|
|
- invariant
|
|
- constant
|
|
tools:
|
|
- snpsites:
|
|
description: Rapidly extracts SNPs from a multi-FASTA alignment.
|
|
homepage: https://www.sanger.ac.uk/tool/snp-sites/
|
|
documentation: https://github.com/sanger-pathogens/snp-sites
|
|
licence: ['GPL-3.0-or-later']
|
|
input:
|
|
- alignment:
|
|
type: file
|
|
description: fasta alignment file
|
|
pattern: "*.{fasta,fas,fa,aln}"
|
|
output:
|
|
- versions:
|
|
type: file
|
|
description: File containing software versions
|
|
pattern: "versions.yml"
|
|
- fasta:
|
|
type: file
|
|
description: Variant fasta file
|
|
pattern: "*.{fas}"
|
|
- constant_sites:
|
|
type: file
|
|
description: Text file containing counts of constant sites
|
|
pattern: "*.{sites.txt}"
|
|
authors:
|
|
- "@avantonder"
|