mirror of
https://github.com/MillironX/nf-core_modules.git
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daab0a77dd
* Update main.nf * Update meta.yml * Re-add logos as not staged in a way that works with MultiQC config files * Update main.nf * Remove now unnecessary input channel * Remove unused channel from tests * Update hAMRonization to 1.1.1 and add hAMRonization farGene * Fix hamronizatio ntests * Prettier * Fix fargene linting * Correct file * Fix fargene output * Apply suggestions from code review Co-authored-by: Jasmin F <73216762+jasmezz@users.noreply.github.com> * Fix summarise tests * Prettier Co-authored-by: Jasmin F <73216762+jasmezz@users.noreply.github.com>
12 lines
616 B
YAML
12 lines
616 B
YAML
- name: hamronization summarize test_hamronization_summarize
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command: nextflow run ./tests/modules/hamronization/summarize -entry test_hamronization_summarize -c ./tests/config/nextflow.config -c ./tests/modules/hamronization/summarize/nextflow.config
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tags:
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- hamronization
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- hamronization/summarize
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files:
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- path: output/hamronization/hamronization_combined_report.json
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md5sum: ab0c899664398193a25a699b92f960b9
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- path: output/hamronization/test.tsv
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md5sum: e886d665bf9fc266be8193859863d2f4
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- path: output/hamronization/test2.tsv
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md5sum: 2d94ecb8be8d9036877e47a81ae92a41
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