mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-12-22 02:58:17 +00:00
6d6e3a018f
* add module for mykrobe predict and genotyphi parse * Update meta.yml Co-authored-by: Simon Pearce <24893913+SPPearce@users.noreply.github.com>
10 lines
510 B
YAML
10 lines
510 B
YAML
- name: mykrobe predict test_mykrobe_predict
|
|
command: nextflow run ./tests/modules/mykrobe/predict -entry test_mykrobe_predict -c ./tests/config/nextflow.config -c ./tests/modules/mykrobe/predict/nextflow.config
|
|
tags:
|
|
- mykrobe/predict
|
|
- mykrobe
|
|
files:
|
|
- path: output/mykrobe/test.csv
|
|
contains: ["susceptibility", "genotype_model", "variants", "test.paired_end.bam"]
|
|
- path: output/mykrobe/test.json
|
|
contains: ["susceptibility", "kmer_count", "files", "test.paired_end.bam"]
|