nickhsmith 454e0acc09 Mpileup intervals (#1955) ... * update tests * update * update * make the manta inputs consistant for germline/somatic/tumoronly * match chromosomes to cram file (chr21) * undo genotypegvfs * undo genotypegvfs * include intervals * update md5 with interval Co-authored-by: Smith Nicholas <smith@in.tum.de>		2022-08-16 14:16:35 +02:00
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main.nf	Mpileup also likes intervals (#1445)	2022-03-25 07:46:51 +01:00
nextflow.config	Update all modules to new NF DSL2 syntax (#1099)	2021-11-26 07:58:40 +00:00
test.yml	Mpileup intervals (#1955)	2022-08-16 14:16:35 +02:00