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e745e167c1
* fix yml formatting * allow fastq.gz and fq.gz as file input, add meta.yml and test * fix yaml files * Revert "allow fastq.gz and fq.gz as file input, add meta.yml and test" This reverts commit 34002d7a7a8c7f7bb4600c3377f35c87849f71a4. * prettier magic! * fix comments for yamllint * remove node version number * fix linting errors Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
11 lines
516 B
YAML
11 lines
516 B
YAML
- name: seqsero2 test_seqsero2
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command: nextflow run ./tests/modules/seqsero2 -entry test_seqsero2 -c ./tests/config/nextflow.config -c ./tests/modules/seqsero2/nextflow.config
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tags:
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- seqsero2
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files:
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- path: output/seqsero2/results/SeqSero_log.txt
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md5sum: d00242dfa734b5abb3622a6048f0b4fb
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- path: output/seqsero2/results/SeqSero_result.tsv
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contains: ["Sample", "Predicted", "Note"]
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- path: output/seqsero2/results/SeqSero_result.txt
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contains: ["Sample", "Predicted", "Note"]
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