mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-12-22 11:08:17 +00:00
7be60774b6
* add module for tbprofiler * Update test.yml * Update meta.yml Co-authored-by: Abhinav Sharma <abhi18av@users.noreply.github.com> Co-authored-by: FriederikeHanssen <Friederike.hanssen@qbic.uni-tuebingen.de>
21 lines
911 B
YAML
21 lines
911 B
YAML
- name: tbprofiler profile illumina
|
|
command: nextflow run ./tests/modules/tbprofiler/profile -entry test_tbprofiler_profile_illumina -c tests/config/nextflow.config
|
|
tags:
|
|
- tbprofiler
|
|
- tbprofiler/profile
|
|
files:
|
|
- path: output/tbprofiler/bam/test.bam
|
|
- path: output/tbprofiler/results/test.results.json
|
|
contains: ['genome_positions', 'locus_tag', 'tbprofiler_version']
|
|
- path: output/tbprofiler/vcf/test.targets.csq.vcf.gz
|
|
|
|
- name: tbprofiler profile nanopore
|
|
command: nextflow run ./tests/modules/tbprofiler/profile -entry test_tbprofiler_profile_nanopore -c tests/config/nextflow.config
|
|
tags:
|
|
- tbprofiler
|
|
- tbprofiler/profile
|
|
files:
|
|
- path: output/tbprofiler/bam/test.bam
|
|
- path: output/tbprofiler/results/test.results.json
|
|
contains: ['genome_positions', 'locus_tag', 'tbprofiler_version']
|
|
- path: output/tbprofiler/vcf/test.targets.csq.vcf.gz
|