mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-11-14 21:53:10 +00:00
5b1fe84bc6
* add new assembly scan module * add newline endings * fix newline ending * add newline at end Co-authored-by: Peri <rrx8@cdc.gov> Co-authored-by: Robert A. Petit III <robbie.petit@gmail.com> Co-authored-by: Gregor Sturm <mail@gregor-sturm.de>
13 lines
368 B
Text
13 lines
368 B
Text
#!/usr/bin/env nextflow
|
|
|
|
nextflow.enable.dsl = 2
|
|
|
|
include { ASSEMBLYSCAN } from '../../../modules/assemblyscan/main.nf' addParams( options: [:] )
|
|
|
|
workflow test_assemblyscan {
|
|
|
|
input = [ [ id:'test', single_end:false ], // meta map
|
|
file(params.test_data['sarscov2']['genome']['genome_fasta'], checkIfExists: true) ]
|
|
|
|
ASSEMBLYSCAN ( input )
|
|
}
|