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34 lines
1.9 KiB
YAML
34 lines
1.9 KiB
YAML
- name: kallistobustools count test_kallistobustools_count
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command: nextflow run ./tests/modules/kallistobustools/count -entry test_kallistobustools_count -c ./tests/config/nextflow.config -c ./tests/modules/kallistobustools/count/nextflow.config
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tags:
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- kallistobustools/count
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- kallistobustools
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files:
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- path: output/kallistobustools/cdna.fa
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- path: output/kallistobustools/kb_ref_out.idx
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- path: output/kallistobustools/t2g.txt
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- path: output/kallistobustools/test.count/10x_version3_whitelist.txt
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md5sum: 3d36d0a4021fd292b265e2b5e72aaaf3
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- path: output/kallistobustools/test.count/counts_unfiltered/cellranger/barcodes.tsv
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md5sum: 8a41142de30df61fbb9551b29dd05a83
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- path: output/kallistobustools/test.count/counts_unfiltered/cellranger/genes.tsv
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md5sum: 1b31f05f9b20a4c0ac3e07b9e3ff3a14
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- path: output/kallistobustools/test.count/counts_unfiltered/cellranger/matrix.mtx
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md5sum: 5b7bff2d19fc90168733f4ac812c7d7b
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- path: output/kallistobustools/test.count/counts_unfiltered/cells_x_genes.barcodes.txt
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md5sum: 8d7ef602416818a598f5680a707756a7
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- path: output/kallistobustools/test.count/counts_unfiltered/cells_x_genes.genes.txt
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md5sum: fe6d5501923867b514a0447aa4b4995f
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- path: output/kallistobustools/test.count/counts_unfiltered/cells_x_genes.mtx
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md5sum: 0a84dc5a7570b5821da4eef6b5769a0c
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- path: output/kallistobustools/test.count/inspect.json
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md5sum: b853330f160e06fc8af170a837384ef5
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- path: output/kallistobustools/test.count/kb_info.json
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- path: output/kallistobustools/test.count/matrix.ec
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- path: output/kallistobustools/test.count/output.bus
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md5sum: f5d8efa83f107826824292cbbdb4e37b
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- path: output/kallistobustools/test.count/output.unfiltered.bus
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md5sum: dcbc651dc64eb38ae14e0b90795b30d2
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- path: output/kallistobustools/test.count/run_info.json
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- path: output/kallistobustools/test.count/transcripts.txt
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