mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-09-21 07:42:05 +00:00
3aacd46da2
* backfilled modules with meta.yml that had no license identifier * harmonized BSD license names * whitespace linting at modules/unzip/meta.yml:12 * harmonized software from US NIH-NCBI/NIST to 'US-Government-Work' * Update modules/bcftools/index/meta.yml `bcftools` is dual-licensed, use associative array to allow for multiple licenses Co-authored-by: Michael L Heuer <heuermh@acm.org> Co-authored-by: Michael L Heuer <heuermh@acm.org>
47 lines
1.3 KiB
YAML
47 lines
1.3 KiB
YAML
name: nanolyse
|
|
description: DNA contaminant removal using NanoLyse
|
|
keywords:
|
|
- contaminant_removal
|
|
tools:
|
|
- nanolyse:
|
|
description: |
|
|
DNA contaminant removal using NanoLyse
|
|
homepage: https://github.com/wdecoster/nanolyse
|
|
documentation: https://github.com/wdecoster/nanolyse#nanolyse
|
|
licence: ['GPL-3.0-or-later']
|
|
input:
|
|
- meta:
|
|
type: map
|
|
description: |
|
|
Groovy Map containing sample information
|
|
e.g. [ id:'test', single_end:false ]
|
|
- fastq:
|
|
type: file
|
|
description: |
|
|
Basecalled reads in FASTQ.GZ format
|
|
pattern: "*.fastq.gz"
|
|
- fasta:
|
|
type: file
|
|
description: |
|
|
A reference fasta file against which to filter.
|
|
pattern: "*.fasta"
|
|
output:
|
|
- meta:
|
|
type: map
|
|
description: |
|
|
Groovy Map containing sample information
|
|
e.g. [ id:'test', single_end:false ]
|
|
- fastq:
|
|
type: file
|
|
description: Reads with contaminants removed in FASTQ format
|
|
pattern: "*.fastq.gz"
|
|
- log:
|
|
type: file
|
|
description: Log of the Nanolyse run.
|
|
pattern: "*.log"
|
|
- versions:
|
|
type: file
|
|
description: File containing software versions
|
|
pattern: "versions.yml"
|
|
authors:
|
|
- "@yuukiiwa"
|