nf-core_modules/tests/software/preseq/lcextrap/test.yml
Kevin Menden 043a7d1e3c
remove deprecated test tags (#440)
* remove deprecated test tags

* fix bowtie, gatk4/applybsqr

* fix gatk4 baserecalibrator

* fixed shovill

* fixed yara/mapper

* fixed kallistobustools/ref paths
2021-04-13 18:03:09 +01:00

19 lines
677 B
YAML

- name: preseq lcextrap single-end
command: nextflow run ./tests/software/preseq/lcextrap -entry test_preseq_single_end -c tests/config/nextflow.config
tags:
- preseq
- preseq/lcextrap
files:
- path: output/preseq/test.ccurve.txt
md5sum: 76ae04c8eaf19c94e3210bb69da38498
- path: output/preseq/test.command.log
- name: preseq lcextrap paired-end
command: nextflow run ./tests/software/preseq/lcextrap -entry test_preseq_paired_end -c tests/config/nextflow.config
tags:
- preseq
- preseq/lcextrap
files:
- path: output/preseq/test.ccurve.txt
md5sum: 2836d2fabd2213f097fd7063db550276
- path: output/preseq/test.command.log