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Patrick Hüther 04704c2034
add bismark/methylation_extractor (#274) 
* add bismark/methylation_extractor

* add tests for bismark/methylation_extractor

* bismark/methylation_extractor: add genome_preparation to filters

* Apply suggestions from code review

Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>

* remove params from meta.yml

* pytest: remove md5sum checks for gzipped output

gzip stores timestamps in the file header, so the checksum will be different each time

Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
2021-03-20 23:54:42 +00:00
..
config add bismark/methylation_extractor (#274) 2021-03-20 23:54:42 +00:00
data Add kraken2 run module (#266) 2021-03-18 13:08:06 +00:00
software add bismark/methylation_extractor (#274) 2021-03-20 23:54:42 +00:00