nf-core_modules/tests/software
Maxime Garcia 05cbbbaded
Rename gatk/createsequencedictionary -> gatk4/createsequencedictionary (#260)
* fix: update and sort filters

* fix: rename gatk/createsequencedictionary -> gatk4/createsequencedictionary
2021-03-08 14:45:46 +01:00
..
bandage/image Converge test data usage (#249) 2021-03-04 10:10:57 +00:00
bcftools Adding arguments to make md5 hashes stable 2021-02-23 19:39:24 +01:00
bedtools Converge test data usage (#249) 2021-03-04 10:10:57 +00:00
bismark Converge test data usage (#249) 2021-03-04 10:10:57 +00:00
blast Converge test data usage (#249) 2021-03-04 10:10:57 +00:00
bowtie Converge test data usage (#249) 2021-03-04 10:10:57 +00:00
bowtie2 Converge test data usage (#249) 2021-03-04 10:10:57 +00:00
bwa Converge test data usage (#249) 2021-03-04 10:10:57 +00:00
bwamem2 Converge test data usage (#249) 2021-03-04 10:10:57 +00:00
bwameth Converge test data usage (#249) 2021-03-04 10:10:57 +00:00
cat/fastq Converge test data usage (#249) 2021-03-04 10:10:57 +00:00
cutadapt Converge test data usage (#249) 2021-03-04 10:10:57 +00:00
dsh Converge test data usage (#249) 2021-03-04 10:10:57 +00:00
fastp Converge test data usage (#249) 2021-03-04 10:10:57 +00:00
fastqc Converge test data usage (#249) 2021-03-04 10:10:57 +00:00
gatk4 Rename gatk/createsequencedictionary -> gatk4/createsequencedictionary (#260) 2021-03-08 14:45:46 +01:00
gffread Converge test data usage (#249) 2021-03-04 10:10:57 +00:00
gunzip Converge test data usage (#249) 2021-03-04 10:10:57 +00:00
ivar Converge test data usage (#249) 2021-03-04 10:10:57 +00:00
methyldackel Converge test data usage (#249) 2021-03-04 10:10:57 +00:00
minimap2/align Converge test data usage (#249) 2021-03-04 10:10:57 +00:00
mosdepth Converge test data usage (#249) 2021-03-04 10:10:57 +00:00
multiqc Converge test data usage (#249) 2021-03-04 10:10:57 +00:00
pangolin Converge test data usage (#249) 2021-03-04 10:10:57 +00:00
picard Converge test data usage (#249) 2021-03-04 10:10:57 +00:00
preseq/lcextrap Fix preseq tests 2021-02-03 17:28:44 +00:00
qualimap/bamqc Converge test data usage (#249) 2021-03-04 10:10:57 +00:00
quast Converge test data usage (#249) 2021-03-04 10:10:57 +00:00
salmon Converge test data usage (#249) 2021-03-04 10:10:57 +00:00
samtools Converge test data usage (#249) 2021-03-04 10:10:57 +00:00
seacr/callpeak Converge test data usage (#249) 2021-03-04 10:10:57 +00:00
seqkit/split2 Add all tests back in 2021-02-24 09:57:23 +01:00
seqwish/induce Converge test data usage (#249) 2021-03-04 10:10:57 +00:00
star Converge test data usage (#249) 2021-03-04 10:10:57 +00:00
stringtie Converge test data usage (#249) 2021-03-04 10:10:57 +00:00
tabix Converge test data usage (#249) 2021-03-04 10:10:57 +00:00
tiddit/sv Check only for vcf file to exists (includes cmd) 2021-02-26 07:14:29 +01:00
TOOL/SUBTOOL fix: update checksum or filename 2021-02-17 01:34:50 +01:00
trimgalore Converge test data usage (#249) 2021-03-04 10:10:57 +00:00
ucsc/bedgraphtobigwig Change path to tests 2021-02-03 16:44:56 +00:00
untar Converge test data usage (#249) 2021-03-04 10:10:57 +00:00