nf-core_modules/software/prodigal/meta.yml
Gregor Sturm e33860a2e8
Prodigal (#333)
* WIP add prodigal

* Implement module and add tests

* Fix EC lint
2021-03-23 11:03:58 -07:00

47 lines
1.4 KiB
YAML

name: prodigal
## TODO nf-core: Add a description of the module and list keywords
description: write your description here
keywords:
- sort
tools:
- prodigal:
## TODO nf-core: Add a description and other details for the software below
description: Prodigal (Prokaryotic Dynamic Programming Genefinding Algorithm) is a microbial (bacterial and archaeal) gene finding program
homepage: {}
documentation: {}
tool_dev_url: {}
doi: ""
licence: ['GPL v3']
## TODO nf-core: Add a description of all of the variables used as input
input:
- meta:
type: map
description: |
Groovy Map containing sample information
e.g. [ id:'test', single_end:false ]
## TODO nf-core: Delete / customise this example input
- bam:
type: file
description: BAM/CRAM/SAM file
pattern: "*.{bam,cram,sam}"
## TODO nf-core: Add a description of all of the variables used as output
output:
- meta:
type: map
description: |
Groovy Map containing sample information
e.g. [ id:'test', single_end:false ]
- version:
type: file
description: File containing software version
pattern: "*.{version.txt}"
## TODO nf-core: Delete / customise this example output
- bam:
type: file
description: Sorted BAM/CRAM/SAM file
pattern: "*.{bam,cram,sam}"
authors:
- "@grst"