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e937c7950a
* Update README * Rename pytest_software.yml to pytest_modules.yml * Rename main software directory to modules * Remove deprecated modules * Rename tests software to modules * Replace paths for tests in pytest_modules.yml * Replace software with modules in Github Actions * Replace software with modules in main.nf tests * Rename software to modules in test.yml
47 lines
1.4 KiB
YAML
47 lines
1.4 KiB
YAML
name: prodigal
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## TODO nf-core: Add a description of the module and list keywords
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description: write your description here
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keywords:
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- sort
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tools:
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- prodigal:
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## TODO nf-core: Add a description and other details for the software below
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description: Prodigal (Prokaryotic Dynamic Programming Genefinding Algorithm) is a microbial (bacterial and archaeal) gene finding program
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homepage: {}
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documentation: {}
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tool_dev_url: {}
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doi: ""
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licence: ['GPL v3']
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## TODO nf-core: Add a description of all of the variables used as input
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input:
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- meta:
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type: map
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description: |
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Groovy Map containing sample information
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e.g. [ id:'test', single_end:false ]
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## TODO nf-core: Delete / customise this example input
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- bam:
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type: file
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description: BAM/CRAM/SAM file
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pattern: "*.{bam,cram,sam}"
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## TODO nf-core: Add a description of all of the variables used as output
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output:
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- meta:
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type: map
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description: |
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Groovy Map containing sample information
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e.g. [ id:'test', single_end:false ]
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- version:
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type: file
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description: File containing software version
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pattern: "*.{version.txt}"
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## TODO nf-core: Delete / customise this example output
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- bam:
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type: file
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description: Sorted BAM/CRAM/SAM file
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pattern: "*.{bam,cram,sam}"
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authors:
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- "@grst"
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