mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-09-22 16:12:04 +00:00
e937c7950a
* Update README * Rename pytest_software.yml to pytest_modules.yml * Rename main software directory to modules * Remove deprecated modules * Rename tests software to modules * Replace paths for tests in pytest_modules.yml * Replace software with modules in Github Actions * Replace software with modules in main.nf tests * Rename software to modules in test.yml
32 lines
929 B
YAML
32 lines
929 B
YAML
name: samtools_faidx
|
|
description: Index FASTA file
|
|
keywords:
|
|
- index
|
|
- fasta
|
|
tools:
|
|
- samtools:
|
|
description: |
|
|
SAMtools is a set of utilities for interacting with and post-processing
|
|
short DNA sequence read alignments in the SAM, BAM and CRAM formats, written by Heng Li.
|
|
These files are generated as output by short read aligners like BWA.
|
|
homepage: http://www.htslib.org/
|
|
documentation: http://www.htslib.org/doc/samtools.html
|
|
doi: 10.1093/bioinformatics/btp352
|
|
input:
|
|
- fasta:
|
|
type: file
|
|
description: FASTA file
|
|
pattern: "*.{fa,fasta}"
|
|
output:
|
|
- fai:
|
|
type: file
|
|
description: FASTA index file
|
|
pattern: "*.{fai}"
|
|
- version:
|
|
type: file
|
|
description: File containing software version
|
|
pattern: "*.{version.txt}"
|
|
authors:
|
|
- "@drpatelh"
|
|
- "@ewels"
|
|
- "@phue"
|