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52c541b080
* rebuild cooler cload. * update test file path of cload. * add pytest for cload * update to version.yml * update the test data path * Update tests/modules/cooler/cload/main.nf Co-authored-by: Sébastien Guizard <sguizard@ed.ac.uk> * Update modules/cooler/cload/main.nf Co-authored-by: Sébastien Guizard <sguizard@ed.ac.uk> * Update tests/config/test_data.config Co-authored-by: Sébastien Guizard <sguizard@ed.ac.uk> * Update main.nf Remove a lonely curly bracket. * Update test.yml Updated with new workflows. * update the test files * merge the conflicts. * update the test.yml * update for change of cooler/dump Co-authored-by: Gregor Sturm <mail@gregor-sturm.de> Co-authored-by: Sébastien Guizard <sguizard@ed.ac.uk> Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
29 lines
1 KiB
YAML
29 lines
1 KiB
YAML
- name: cooler cload test_cooler_cload_pairix
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command: nextflow run tests/modules/cooler/cload -entry test_cooler_cload_pairix -c tests/config/nextflow.config
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tags:
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- cooler/cload
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- cooler
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files:
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- path: output/cooler/test_pairix.2000000.cool
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- path: output/cooler/test_pairix.bedpe
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md5sum: 0cd85311089669688ec17468eae02111
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- name: cooler cload test_cooler_cload_pairs
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command: nextflow run tests/modules/cooler/cload -entry test_cooler_cload_pairs -c tests/config/nextflow.config
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tags:
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- cooler/cload
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- cooler
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files:
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- path: output/cooler/test_pairs.2000000.cool
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- path: output/cooler/test_pairs.bedpe
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md5sum: 7f832733fc7853ebb1937b33e4c1e0de
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- name: cooler cload test_cooler_cload_tabix
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command: nextflow run tests/modules/cooler/cload -entry test_cooler_cload_tabix -c tests/config/nextflow.config
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tags:
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- cooler/cload
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- cooler
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files:
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- path: output/cooler/test_tabix.2000000.cool
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- path: output/cooler/test_tabix.bedpe
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md5sum: 0cd85311089669688ec17468eae02111
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