nf-core_modules/tests/modules/genrich/test.yml
Jose Espinosa-Carrasco 0a7368aa6f
Refactor genrich to avoid params in main (#981)
* Refactor genrich to avoid params in main

* Missed to commit test.yml file
2021-10-29 16:37:39 +02:00

47 lines
1.7 KiB
YAML

- name: genrich test_genrich
command: nextflow run tests/modules/genrich -entry test_genrich -c tests/config/nextflow.config
tags:
- genrich
files:
- path: output/genrich/test.narrowPeak
md5sum: 6afabdd3f691c7c84c66ff8a23984681
- name: genrich test_genrich_ctrl
command: nextflow run tests/modules/genrich -entry test_genrich_ctrl -c tests/config/nextflow.config
tags:
- genrich
files:
- path: output/genrich/test.narrowPeak
md5sum: 2fcc392360b317f5ebee88cdbc149e05
- name: genrich test_genrich_all_outputs
command: nextflow run tests/modules/genrich -entry test_genrich_all_outputs -c tests/config/nextflow.config
tags:
- genrich
files:
- path: output/genrich/test.duplicates.txt
md5sum: 159d557af7c23bc3cfb802d87fa96c34
- path: output/genrich/test.intervals.bed
md5sum: 4bea65caa3f4043d703af4b57161112e
- path: output/genrich/test.narrowPeak
md5sum: d41d8cd98f00b204e9800998ecf8427e
- path: output/genrich/test.pileup.bedGraph
md5sum: 03e53848de695b5794f32f15b2709203
- path: output/genrich/test.pvalues.bedGraph
md5sum: b14feef34b6d2379a173a734ca963cde
- name: genrich test_genrich_blacklist
command: nextflow run tests/modules/genrich -entry test_genrich_blacklist -c tests/config/nextflow.config
tags:
- genrich
files:
- path: output/genrich/test.narrowPeak
md5sum: 6afabdd3f691c7c84c66ff8a23984681
- name: genrich test_genrich_atacseq
command: nextflow run tests/modules/genrich -entry test_genrich_atacseq -c tests/config/nextflow.config
tags:
- genrich
files:
- path: output/genrich/test.narrowPeak
md5sum: ddea556b820f8be3695ffdf6c6f70aff