mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-11-10 20:23:10 +00:00
171a2a2dbf
* Unicycler with long read input * tests and md5sums * remove unstable md5sums * Update modules/unicycler/main.nf Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
32 lines
1.1 KiB
YAML
32 lines
1.1 KiB
YAML
- name: unicycler test_unicycler_single_end
|
|
command: nextflow run tests/modules/unicycler -entry test_unicycler_single_end -c tests/config/nextflow.config
|
|
tags:
|
|
- unicycler
|
|
files:
|
|
- path: output/unicycler/test.assembly.gfa.gz
|
|
- path: output/unicycler/test.scaffolds.fa.gz
|
|
- path: output/unicycler/test.unicycler.log
|
|
contains:
|
|
- "Assembly complete"
|
|
|
|
- name: unicycler test_unicycler_paired_end
|
|
command: nextflow run tests/modules/unicycler -entry test_unicycler_paired_end -c tests/config/nextflow.config
|
|
tags:
|
|
- unicycler
|
|
files:
|
|
- path: output/unicycler/test.assembly.gfa.gz
|
|
- path: output/unicycler/test.scaffolds.fa.gz
|
|
- path: output/unicycler/test.unicycler.log
|
|
contains:
|
|
- "Assembly complete"
|
|
|
|
- name: unicycler test_unicycler_shortreads_longreads
|
|
command: nextflow run tests/modules/unicycler -entry test_unicycler_shortreads_longreads -c tests/config/nextflow.config
|
|
tags:
|
|
- unicycler
|
|
files:
|
|
- path: output/unicycler/test.assembly.gfa.gz
|
|
- path: output/unicycler/test.scaffolds.fa.gz
|
|
- path: output/unicycler/test.unicycler.log
|
|
contains:
|
|
- "Assembly complete"
|