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e745e167c1
* fix yml formatting * allow fastq.gz and fq.gz as file input, add meta.yml and test * fix yaml files * Revert "allow fastq.gz and fq.gz as file input, add meta.yml and test" This reverts commit 34002d7a7a8c7f7bb4600c3377f35c87849f71a4. * prettier magic! * fix comments for yamllint * remove node version number * fix linting errors Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
31 lines
747 B
YAML
31 lines
747 B
YAML
name: genmap_index
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description: create index file for genmap
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keywords:
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- index
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tools:
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- genmap:
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description: Ultra-fast computation of genome mappability.
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homepage: https://github.com/cpockrandt/genmap
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documentation: https://github.com/cpockrandt/genmap
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tool_dev_url: https://github.com/cpockrandt/genmap
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doi: "10.1093/bioinformatics/btaa222"
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licence: ["BSD-3-Clause"]
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input:
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- fasta:
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type: file
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description: fasta file
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pattern: "*.{fasta,fa}"
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output:
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- versions:
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type: file
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description: File containing software versions
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pattern: "versions.yml"
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- index:
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type: index
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description: Genmap index file
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pattern: "{index}.*"
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authors:
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- "@jianhong"
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