Priyanka Surana 22e144dc63 samtools markdup module (#2087)		2022-09-21 15:39:10 +01:00
..
ampliconclip
bam2fq	Remove variable md5sum from the tests	2022-05-05 08:32:45 +02:00
collate	samtools collate module (#2078)	2022-09-21 14:12:59 +01:00
collatefastq	Add samtools/collatefastq module (#1536)	2022-04-20 10:05:17 +02:00
convert	Generalize Bam2Cram do either conversion	2022-05-09 15:22:54 +02:00
depth
dict	Added the samtools/dict module (#1922)	2022-07-26 22:13:19 +01:00
faidx	Added the optional .gzi output of "samtools faidx" (#1935)	2022-09-08 13:35:23 +01:00
fastq
fixmate
flagstat	Fix/samtools flagstat (#1979)	2022-08-29 13:11:58 +02:00
idxstats	samtools/*stats*: use prefix for outputs (#1788)	2022-06-16 13:42:01 +02:00
index
markdup	samtools markdup module (#2087)	2022-09-21 15:39:10 +01:00
merge	small update to samtools/merge (#1896)	2022-07-18 11:37:45 +02:00
mpileup	Mpileup intervals (#1955)	2022-08-16 14:16:35 +02:00
sort
stats	fix samtools stats thread usage (#1975)	2022-08-29 12:05:47 +02:00
view	fix datatest for stubs	2022-05-06 15:34:18 +02:00