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applybqsr
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Improve syntax/logic coherence in all gatk4 plugins (#1459)
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2022-04-12 17:15:39 +02:00 |
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applybqsrspark
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Improve syntax/logic coherence in all gatk4 plugins (#1459)
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2022-04-12 17:15:39 +02:00 |
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applyvqsr
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Improve syntax/logic coherence in all gatk4 plugins (#1459)
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2022-04-12 17:15:39 +02:00 |
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baserecalibrator
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Improve syntax/logic coherence in all gatk4 plugins (#1459)
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2022-04-12 17:15:39 +02:00 |
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baserecalibratorspark
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Improve syntax/logic coherence in all gatk4 plugins (#1459)
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2022-04-12 17:15:39 +02:00 |
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bedtointervallist
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Improve syntax/logic coherence in all gatk4 plugins (#1459)
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2022-04-12 17:15:39 +02:00 |
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calculatecontamination
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Improve syntax/logic coherence in all gatk4 plugins (#1459)
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2022-04-12 17:15:39 +02:00 |
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combinegvcfs
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Improve syntax/logic coherence in all gatk4 plugins (#1459)
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2022-04-12 17:15:39 +02:00 |
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createsequencedictionary
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Improve syntax/logic coherence in all gatk4 plugins (#1459)
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2022-04-12 17:15:39 +02:00 |
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createsomaticpanelofnormals
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Improve syntax/logic coherence in all gatk4 plugins (#1459)
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2022-04-12 17:15:39 +02:00 |
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estimatelibrarycomplexity
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Improve syntax/logic coherence in all gatk4 plugins (#1459)
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2022-04-12 17:15:39 +02:00 |
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fastqtosam
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Improve syntax/logic coherence in all gatk4 plugins (#1459)
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2022-04-12 17:15:39 +02:00 |
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filtermutectcalls
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Improve syntax/logic coherence in all gatk4 plugins (#1459)
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2022-04-12 17:15:39 +02:00 |
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gatherbqsrreports
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Improve syntax/logic coherence in all gatk4 plugins (#1459)
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2022-04-12 17:15:39 +02:00 |
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gatherpileupsummaries
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Improve syntax/logic coherence in all gatk4 plugins (#1459)
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2022-04-12 17:15:39 +02:00 |
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genomicsdbimport
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Improve syntax/logic coherence in all gatk4 plugins (#1459)
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2022-04-12 17:15:39 +02:00 |
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genotypegvcfs
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Improve syntax/logic coherence in all gatk4 plugins (#1459)
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2022-04-12 17:15:39 +02:00 |
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getpileupsummaries
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Improve syntax/logic coherence in all gatk4 plugins (#1459)
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2022-04-12 17:15:39 +02:00 |
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haplotypecaller
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Changed tbi as optional output in GATK4 HaplotypeCaller (#1576)
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2022-04-28 13:41:20 +02:00 |
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indexfeaturefile
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Improve syntax/logic coherence in all gatk4 plugins (#1459)
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2022-04-12 17:15:39 +02:00 |
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intervallisttobed
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Improve syntax/logic coherence in all gatk4 plugins (#1459)
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2022-04-12 17:15:39 +02:00 |
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intervallisttools
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Improve syntax/logic coherence in all gatk4 plugins (#1459)
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2022-04-12 17:15:39 +02:00 |
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learnreadorientationmodel
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Improve syntax/logic coherence in all gatk4 plugins (#1459)
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2022-04-12 17:15:39 +02:00 |
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markduplicates
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Improve syntax/logic coherence in all gatk4 plugins (#1459)
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2022-04-12 17:15:39 +02:00 |
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markduplicatesspark
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typo in command line (#1523)
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2022-04-13 15:15:44 +02:00 |
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mergebamalignment
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feat added stub to modules
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2022-05-02 10:34:14 +02:00 |
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mergemutectstats
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Improve syntax/logic coherence in all gatk4 plugins (#1459)
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2022-04-12 17:15:39 +02:00 |
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mergevcfs
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Improve syntax/logic coherence in all gatk4 plugins (#1459)
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2022-04-12 17:15:39 +02:00 |
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mutect2
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feat added stub to modules
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2022-05-02 10:34:14 +02:00 |
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revertsam
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fix the stub of gatk4_revertsam
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2022-05-02 11:06:08 +02:00 |
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samtofastq
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feat added stub to modules
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2022-05-02 10:34:14 +02:00 |
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selectvariants
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Improve syntax/logic coherence in all gatk4 plugins (#1459)
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2022-04-12 17:15:39 +02:00 |
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splitncigarreads
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add intervals possibilities to splitncigarreads (#1571)
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2022-04-27 16:03:44 +02:00 |
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variantfiltration
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Improve syntax/logic coherence in all gatk4 plugins (#1459)
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2022-04-12 17:15:39 +02:00 |
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variantrecalibrator
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Improve syntax/logic coherence in all gatk4 plugins (#1459)
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2022-04-12 17:15:39 +02:00 |
