nf-core_modules/tests/modules/seqtk/seq/test.yml
James A. Fellows Yates 90aef30f43
Set process label to process_single for modules with no task.cpus usage (#2076)
* Set process label to `process_single` for modules with no `task.cpus` usage

* Fix tests of 'borked' modules

* prettier

* More modules are single-threaded and can use process_single

* Adding process_single to hmmer/esl* modules

* Fix failing tests

* Prettier

Co-authored-by: Matthieu Muffato <mm49@sanger.ac.uk>
Co-authored-by: Daniel Lundin <erik.rikard.daniel@gmail.com>
2022-09-19 11:54:47 +02:00

18 lines
552 B
YAML

- name: seqtk seq test_seqtk_seq
command: nextflow run tests/modules/seqtk/seq -entry test_seqtk_seq -c tests/config/nextflow.config
tags:
- seqtk/seq
- seqtk
files:
- path: output/seqtk/test.seqtk-seq.fasta.gz
md5sum: 50d73992c8c7e56dc095ef47ec52a754
- name: seqtk seq test_seqtk_seq_fq
command: nextflow run tests/modules/seqtk/seq -entry test_seqtk_seq_fq -c tests/config/nextflow.config
tags:
- seqtk/seq
- seqtk
files:
- path: output/seqtk/test.seqtk-seq.fasta.gz
contains:
- ">ERR5069949"