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41 lines
1,008 B
YAML
41 lines
1,008 B
YAML
name: "bedtools_split"
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description: Split BED files into several smaller BED files
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keywords:
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- sort
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tools:
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- "bedtools":
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description: "A powerful toolset for genome arithmetic"
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documentation: "https://bedtools.readthedocs.io/en/latest/content/tools/sort.html"
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licence: "['MIT', 'GPL v2']"
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input:
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- meta:
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type: map
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description: |
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Groovy Map containing sample information
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e.g. [ id:'test', single_end:false ]
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- bed:
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type: file
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description: BED file
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pattern: "*.bed"
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- bed:
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type: value
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description: The number of files to split the BED into
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output:
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- meta:
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type: map
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description: |
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Groovy Map containing sample information
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e.g. [ id:'test', single_end:false ]
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- versions:
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type: file
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description: File containing software versions
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pattern: "versions.yml"
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- beds:
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type: file
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description: list of split BED files
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pattern: "*.bed"
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authors:
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- "@nvnieuwk"
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