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38383cfaef
* Update eido/validate module * Update modules/eido/validate/meta.yml Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>
23 lines
1,021 B
Text
23 lines
1,021 B
Text
#!/usr/bin/env nextflow
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nextflow.enable.dsl = 2
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include { EIDO_VALIDATE } from '../../../../modules/eido/validate/main.nf'
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workflow test_eido_validate_on_nextflow_samplesheet {
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samplesheet = file("https://github.com/nf-core/test-datasets/raw/modules/data/delete_me/pep/test_nextflow_original_samplesheet.csv", checkIfExists: true)
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schema = file("https://github.com/nf-core/test-datasets/raw/modules/data/delete_me/pep/test_samplesheet_schema.yaml", checkIfExists: true)
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pep_input_base_dir = []
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EIDO_VALIDATE ( samplesheet, schema, pep_input_base_dir )
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}
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workflow test_eido_validate_on_pep_config {
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samplesheet = file("https://raw.githubusercontent.com/nf-core/test-datasets/modules/data/delete_me/pep/test_pep_format_files/config.yaml", checkIfExists: true)
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schema = file("https://github.com/nf-core/test-datasets/raw/modules/data/delete_me/pep/test_samplesheet_schema.yaml", checkIfExists: true)
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pep_input_base_dir = []
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EIDO_VALIDATE ( samplesheet, schema, pep_input_base_dir )
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}
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