nf-core_modules/tests/modules/samtools/collate/test.yml
Priyanka Surana ab4c2e440d
samtools collate module (#2078)
* samtools collate module

* prettier fix

* prettier fix

* added cram functionality
2022-09-21 14:12:59 +01:00

17 lines
729 B
YAML

- name: samtools collate test_samtools_collate
command: nextflow run ./tests/modules/samtools/collate -entry test_samtools_collate -c ./tests/config/nextflow.config -c ./tests/modules/samtools/collate/nextflow.config
tags:
- samtools/collate
- samtools
files:
- path: output/samtools/test.bam
md5sum: dbb8244c28778a970e49577731b158df
- name: samtools collate test_samtools_collate_cram
command: nextflow run ./tests/modules/samtools/collate -entry test_samtools_collate_cram -c ./tests/config/nextflow.config -c ./tests/modules/samtools/collate/nextflow.config
tags:
- samtools/collate
- samtools
files:
- path: output/samtools/test.bam
md5sum: 81aa61ed1f6f3bf6b9c94f70cbf2a177