mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-09-21 15:52:05 +00:00
5e18e36895
* Fixes for PR 371 * Fix tags * Add md5sum * Add md5sums for stringtie * Fix tests for modules where subtool = build * Fix pytest_software name conflicts * Change _ to / in test.yml tags * Nope...that didnt work * Fix sequenzautils/bam2seqz tests
14 lines
492 B
Text
14 lines
492 B
Text
#!/usr/bin/env nextflow
|
|
|
|
nextflow.enable.dsl = 2
|
|
|
|
include { UCSC_BED12TOBIGBED } from '../../../../software/ucsc/bed12tobigbed/main.nf' addParams( options: [:] )
|
|
|
|
workflow test_ucsc_bed12tobigbed {
|
|
input = [ [ id: 'test' ], // meta map
|
|
[ file(params.test_data['sarscov2']['genome']['test_bed12'], checkIfExists: true ) ]
|
|
]
|
|
sizes = file(params.test_data['sarscov2']['genome']['genome_sizes'], checkIfExists: true)
|
|
|
|
UCSC_BED12TOBIGBED ( input, sizes )
|
|
}
|