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* feat: add template for Bracken * chore: update version * refactor: change command build * refactor: rename report variable, change quotes * docs: remove refactored input parameter * fix: correctly assign arguments to options * tests: set up single and paired end tests * style: apply prettier * chore: change data sources to official ones * refactor: rename test workflows * tests: use correct input to the new UNTAR module * chore: update md5sums |
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main.nf | ||
nextflow.config | ||
test.yml |